PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW34385.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

SBP

Protein Properties

Length: 712aa MW: 79286 Da PI: 6.8122

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW34385.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	62.8	8e-20	169	229	1	76
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkk 76 +Cqv++C+adls+ak+yh+rhkvCevhsk++++lv +++qrfCqqCs rrrLa+hn+rrrk+ RWW34385.1 169 MCQVDDCKADLSSAKDYHKRHKVCEVHSKTAKALVGKQMQRFCQQCS---------------RRRLAGHNRRRRKT 229 6*********************************************9...............58999999999997 PP

Sequence ? help Back to Top
Protein Sequence Length: 712 aa Download sequence
MEGEVGAQVA PSVFFHQHQA LPGPFHEAPL LAKKRDFPWK NNPNFPHGQE QEIQRHRLMG 60 VSLPSHGGNW NPRMWDWDGG TFTAKPSTDA SEVLHPGSQP SSYAAAAVVD QRKGDEGPKD 120 STFGRNLAED DQNLALKLGG GAFTVDEPAA RPNKRVRSGS PGSSGNYPMC QVDDCKADLS 180 SAKDYHKRHK VCEVHSKTAK ALVGKQMQRF CQQCSRRRLA GHNRRRRKTL PDDVSSKLLP 240 PRSQESTTNG NLDIVNLLAI FARLQAGVLT NKCPDRSGVE VPCRIVQKAR QSLPLQLFGP 300 ADDESPAELA STVKYLSSES SNPMEERSPS SSPPVTKKLF PLHSTMERQK YAQASECQED 360 NATIELSVSH GRSAQLQHFK ESDTLVEDGA APSATRRAAY RSSGSDHSPS SSNSGAQDRT 420 GRITFKLFGK DPSCFPDTLR AQLEDDLLQR VTSLVQYSDT EFWRNGRFLA PNDIAVNCSK 480 NDLATFWNML FNSPCSRLSF EFHSQVENGF KGNSFPVIIA DANICQELRA LESDFDEDVQ 540 TADAIPEEQV HCSVQPRSRA DVMHFLNELG WLFQRTNASS SRTLPDFSIT RLKYLFTFSV 600 ERDWCNLIKT LLDILVERSL RNDASKQESL EMLSEVHLLI RAVNRKSKQM IDLLLHYCVC 660 HGEDATKVYL FPPNMAGPGG MTPLHMAAYM QDAEDIVDAL TNDPQEVRLI LM

Sequence ? help Back to Top

Protein Sequence Length: 712 aa Download sequence

MEGEVGAQVA PSVFFHQHQA LPGPFHEAPL LAKKRDFPWK NNPNFPHGQE QEIQRHRLMG  60
VSLPSHGGNW NPRMWDWDGG TFTAKPSTDA SEVLHPGSQP SSYAAAAVVD QRKGDEGPKD  120
STFGRNLAED DQNLALKLGG GAFTVDEPAA RPNKRVRSGS PGSSGNYPMC QVDDCKADLS  180
SAKDYHKRHK VCEVHSKTAK ALVGKQMQRF CQQCSRRRLA GHNRRRRKTL PDDVSSKLLP  240
PRSQESTTNG NLDIVNLLAI FARLQAGVLT NKCPDRSGVE VPCRIVQKAR QSLPLQLFGP  300
ADDESPAELA STVKYLSSES SNPMEERSPS SSPPVTKKLF PLHSTMERQK YAQASECQED  360
NATIELSVSH GRSAQLQHFK ESDTLVEDGA APSATRRAAY RSSGSDHSPS SSNSGAQDRT  420
GRITFKLFGK DPSCFPDTLR AQLEDDLLQR VTSLVQYSDT EFWRNGRFLA PNDIAVNCSK  480
NDLATFWNML FNSPCSRLSF EFHSQVENGF KGNSFPVIIA DANICQELRA LESDFDEDVQ  540
TADAIPEEQV HCSVQPRSRA DVMHFLNELG WLFQRTNASS SRTLPDFSIT RLKYLFTFSV  600
ERDWCNLIKT LLDILVERSL RNDASKQESL EMLSEVHLLI RAVNRKSKQM IDLLLHYCVC  660
HGEDATKVYL FPPNMAGPGG MTPLHMAAYM QDAEDIVDAL TNDPQEVRLI LM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G20980.1	3e-68	SBP family protein