PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW34610.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

bHLH

Protein Properties

Length: 410aa MW: 44628.3 Da PI: 10.6875

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW34610.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	21.9	3.1e-07	279	322	7	55
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 e r+RR++i ++ + +l+P++ ++++ ++Le+A +YI+ Lq RWW34610.1 279 ELSRQRRKKISDRTRIIESLMPWD-----RRMDTGSMLEEAYKYIRFLQ 322 5669*****************9.....89***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 410 aa Download sequence
MIGGIAGNKK GYDAVGLWSR TQPARPPGEH HRHFLPASAL ERVLSSSETI TRVPSSLFAL 60 INATLLLLSC AVSCFRFGFH FRSHVGSVGV YGSRGCAMEG KNAKALLHPP FVALSSVVLG 120 SSEERRGTAS KIFPLTSSIA AGWRPFCFSH DDVGHSHIFL SPAAGSNHLT CVPERCPKLT 180 TTKIEPLESE APDSILVAGG SPGFHRLPML RSLEPLPLAT KLPSVPLGIP SGDLISVMEP 240 SHKRFRGSSA SFSWSPPPRA PPPTASTAPR HRRPLPSSEL SRQRRKKISD RTRIIESLMP 300 WDRRMDTGSM LEEAYKYIRF LQTQVAALRW MPTAAEFSAA PVSSGRGAGL GGLERLNRQQ 360 MLQVVVNSRR VQEKLYEKGL CVFSVEQVAS LQKEVERRPP FGAAVNASSD

Sequence ? help Back to Top

Protein Sequence Length: 410 aa Download sequence

MIGGIAGNKK GYDAVGLWSR TQPARPPGEH HRHFLPASAL ERVLSSSETI TRVPSSLFAL  60
INATLLLLSC AVSCFRFGFH FRSHVGSVGV YGSRGCAMEG KNAKALLHPP FVALSSVVLG  120
SSEERRGTAS KIFPLTSSIA AGWRPFCFSH DDVGHSHIFL SPAAGSNHLT CVPERCPKLT  180
TTKIEPLESE APDSILVAGG SPGFHRLPML RSLEPLPLAT KLPSVPLGIP SGDLISVMEP  240
SHKRFRGSSA SFSWSPPPRA PPPTASTAPR HRRPLPSSEL SRQRRKKISD RTRIIESLMP  300
WDRRMDTGSM LEEAYKYIRF LQTQVAALRW MPTAAEFSAA PVSSGRGAGL GGLERLNRQQ  360
MLQVVVNSRR VQEKLYEKGL CVFSVEQVAS LQKEVERRPP FGAAVNASSD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22100.1	1e-24	bHLH family protein