PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW34628.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family NF-YC
Protein Properties Length: 218aa    MW: 24082.3 Da    PI: 5.2477
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW34628.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC178.56.1e-56241281102
       NF-YC   1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdiv 96 
                 ql++fw++q   ie+atdfknh+lPlarikki+kadedv+misaeaP+l++kacelfilelt+rswlhaeenkrrtl+k+diaaa++rtdifdflvdiv
  RWW34628.1  24 QLQMFWNYQrqeIEHATDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAISRTDIFDFLVDIV 122
                 89*****998899************************************************************************************** PP

       NF-YC  97 prdelk 102
                 pr+e+k
  RWW34628.1 123 PREEIK 128
                 **9975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    
MDNQPPHSYP QAPFHHLLQQ QHQQLQMFWN YQRQEIEHAT DFKNHQLPLA RIKKIMKADE  60
DVRMISAEAP ILFAKACELF ILELTIRSWL HAEENKRRTL QKNDIAAAIS RTDIFDFLVD  120
IVPREEIKEE ALGLVGGSGE GGATAGVPYY YPPVGQPGPG VIMGQPAVAG IDPAIYVQQQ  180
AWQPLWHQGL PEDGTGQGLD GSGYAAAPPP PPPAPPSS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
197103RRTLQKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G63470.28e-69NF-YC family protein