PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW34637.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

TCP

Protein Properties

Length: 404aa MW: 44125.9 Da PI: 8.2422

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW34637.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	124.2	1.5e-38	26	126	3	105
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssgkaaksaa.kskks 100 +k+++++++hTkv+gR+RRvR++a+caar+F+L++eLG+++d++ti+WLlqqa+ +i+++tg+++++as +ssssa+ + +++a+++a ++++ RWW34637.1 26 PKRSSKKDRHTKVDGRGRRVRMPALCAARIFQLTRELGHKSDGETIQWLLQQAESSIIAATGSGTIPASVL---TSSSSAAGTNLADSATASAgLHHNK 121 7999****************************************************************666...3344444334443333333233333 PP TCP 101 qksaa 105 +++ RWW34637.1 122 FQESG 126 33333 PP

Sequence ? help Back to Top
Protein Sequence Length: 404 aa Download sequence
MASQPNRNAH LAVTAEKGEQ RRHLVPKRSS KKDRHTKVDG RGRRVRMPAL CAARIFQLTR 60 ELGHKSDGET IQWLLQQAES SIIAATGSGT IPASVLTSSS SAAGTNLADS ATASAGLHHN 120 KFQESGQNRV NWATFGRPHP ELWLPPVDGF DASFFQSAAA AMPVASNLPR IGFPALELPE 180 PNTNQMSFTS LLGGQRPPMP GLELGLSQHG QVGILNPQAL KHTSIELIGR DRPGLLSEIF 240 AVLVDLKCNV VAAEVWTHNS RMASVVYITD EVNGGPIDDS DRLAKVKRLL RYILKGDRDK 300 SAKTAISVGV THTQRRLHQM LYADRDYDKD DTDGEDAASD RSKPVVTVEN CTEKGYSMVN 360 LRCKDRPKLL FDTVCTLTDM QYVVFHATVI AEGPEAYQVS ADSL

Sequence ? help Back to Top

Protein Sequence Length: 404 aa Download sequence

MASQPNRNAH LAVTAEKGEQ RRHLVPKRSS KKDRHTKVDG RGRRVRMPAL CAARIFQLTR  60
ELGHKSDGET IQWLLQQAES SIIAATGSGT IPASVLTSSS SAAGTNLADS ATASAGLHHN  120
KFQESGQNRV NWATFGRPHP ELWLPPVDGF DASFFQSAAA AMPVASNLPR IGFPALELPE  180
PNTNQMSFTS LLGGQRPPMP GLELGLSQHG QVGILNPQAL KHTSIELIGR DRPGLLSEIF  240
AVLVDLKCNV VAAEVWTHNS RMASVVYITD EVNGGPIDDS DRLAKVKRLL RYILKGDRDK  300
SAKTAISVGV THTQRRLHQM LYADRDYDKD DTDGEDAASD RSKPVVTVEN CTEKGYSMVN  360
LRCKDRPKLL FDTVCTLTDM QYVVFHATVI AEGPEAYQVS ADSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27010.1	3e-57	TCP family protein