PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW34692.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

C2H2

Protein Properties

Length: 483aa MW: 53524.5 Da PI: 8.7726

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW34692.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.3	1.4e-05	77	99	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H RWW34692.1 77 FVCEICNKGFQRDQNLQLHRRGH 99 89*******************88 PP
2	zf-C2H2	11.3	0.0011	152	174	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H + + RWW34692.1 152 WKCDKCSKKYAVQSDWKAHFKIC 174 58*****************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 483 aa Download sequence
MEGLVIVEEN MSNLTSASGE ASASSNQQSS LISREPSPVK KKRNLPGNPV ALWVLILDPD 60 AEVIAMSPKT LMATNRFVCE ICNKGFQRDQ NLQLHRRGHN LPWKLKQRSK EARKKVYVCP 120 EVTCVHHEPS RALGDLTGIK KHFSRKHGEK KWKCDKCSKK YAVQSDWKAH FKICGTREYR 180 CDCGTLFSRR DSFVTHRAFC DALTERNSRV GITANPIADR HLLQCSHPTA PLEPFPLQQP 240 VLQSQFTRLM RATEVRYSPL SSHGLQQELA LKREQQQHFD RSDIPPWLNC EAITSLNYFD 300 VMPSSIYPMR LDEAYPHENP VPPPPFFPTY HSATSFPNMS ATALLQQAAQ MGSTVSRPSD 360 TDQMATHTVH DPSTYNATSG FDLGLSSSHQ EVSGGRGGGS GQVFAPPALL QDMMLNPLSS 420 TPGFAGSFDD ALGRIPGFKR RQNSFADGVV RSQGRDEGGG VGGNNGMTID FLGPRAVFPQ 480 GYP

Sequence ? help Back to Top

Protein Sequence Length: 483 aa Download sequence

MEGLVIVEEN MSNLTSASGE ASASSNQQSS LISREPSPVK KKRNLPGNPV ALWVLILDPD  60
AEVIAMSPKT LMATNRFVCE ICNKGFQRDQ NLQLHRRGHN LPWKLKQRSK EARKKVYVCP  120
EVTCVHHEPS RALGDLTGIK KHFSRKHGEK KWKCDKCSKK YAVQSDWKAH FKICGTREYR  180
CDCGTLFSRR DSFVTHRAFC DALTERNSRV GITANPIADR HLLQCSHPTA PLEPFPLQQP  240
VLQSQFTRLM RATEVRYSPL SSHGLQQELA LKREQQQHFD RSDIPPWLNC EAITSLNYFD  300
VMPSSIYPMR LDEAYPHENP VPPPPFFPTY HSATSFPNMS ATALLQQAAQ MGSTVSRPSD  360
TDQMATHTVH DPSTYNATSG FDLGLSSSHQ EVSGGRGGGS GQVFAPPALL QDMMLNPLSS  420
TPGFAGSFDD ALGRIPGFKR RQNSFADGVV RSQGRDEGGG VGGNNGMTID FLGPRAVFPQ  480
GYP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	104	115	KLKQRSKEARKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G55110.1	9e-97	C2H2 family protein