PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW34806.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

C3H

Protein Properties

Length: 230aa MW: 25000 Da PI: 7.9721

Description

C3H family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW34806.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-CCCH	31.5	3e-10	121	143	4	26
---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 4 elCrffartGtCkyGdrCkFaHg 26 ++C++++rtG Ck+ +C+++H+ RWW34806.1 121 KECPYYMRTGNCKFSTNCRYHHP 143 68********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 230 aa Download sequence
MHGTSSGRYA YRYPIVPKTT REEHEESSSI MEVQTSCRVD EKEKEIAHSF MQLKCEAKAA 60 REKGKETTSE KGQQTEFKAA MEEGKETTLG KGGLIEHKAA MEKGKETTLE KGGQIECKGA 120 KECPYYMRTG NCKFSTNCRY HHPDPTIAMA GQDPLSGCRS SGSMQQSAFG ASTIPVTPSH 180 SQGTLNGATS FVVASPSCSP ASNLHSQGFH SNSGCNGYQV IFTVHVLKFL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G63260.2	1e-10	C3H family protein