PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW34862.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 249aa MW: 28720.3 Da PI: 8.4729

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW34862.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	47.5	4e-15	39	86	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT++Ed++lv v++lG ++W+ a+ g++R++k+c++rw +yl RWW34862.1 39 KGPWTEQEDLQLVWFVRLLGERRWDFLAKVSGLNRSGKSCRLRWVNYL 86 79********************************************97 PP
2	Myb_DNA-binding	56.7	5.5e-18	92	141	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqkyl 48 rgr+T++E++l v++++++G++ +W++Iar+++ gRt++++k++w++++ RWW34862.1 92 RGRMTPQEEDLVVELHAKWGNRfdrRWSRIARRLP-GRTDNEIKNYWRTHM 141 89*******************************.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 249 aa Download sequence
MVWRGCAYKS DTTRREKREE SVKPVYKSPM EPPPPPPTKG PWTEQEDLQL VWFVRLLGER 60 RWDFLAKVSG LNRSGKSCRL RWVNYLHPGL KRGRMTPQEE DLVVELHAKW GNRFDRRWSR 120 IARRLPGRTD NEIKNYWRTH MRKKAQERRT CSPSPSPSSS SSSNGPPSEL RVGDSVAEGS 180 AFTSGLEVTD DEVKGYTMDQ IWNEIAASDS CNMECPPTSS PIWEDKSESL WRLDDEDLRI 240 SNPVSDLLL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G59780.3	1e-69	MYB family protein