PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW34977.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

Trihelix

Protein Properties

Length: 416aa MW: 46576.7 Da PI: 10.7197

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW34977.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	64	3.3e-20	116	208	2	87
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkm....rergf.erspkqCkekwenlnkrykkikegekkr..tsessstcpyfdqlea 87 Wt++e+laLi+a+r+++ +lrrg+l++ +W+ev++ + +++ +s++qC++k e+l+kry+ +++ + + + s+++yf++++a RWW34977.1 116 WTHEETLALIDAYRDKWYALRRGNLRASHWQEVADDVarrcPSGPSpPKSSVQCRHKVEKLRKRYRSERHKSLQLdpSLAPASSWVYFRKMDA 208 ********************************999666533344489***************9998877333345679*****85 PP

Sequence ? help Back to Top
Protein Sequence Length: 416 aa Download sequence
MGQPQSRCNN ENIGGCDWEG CKGKSCKWLS SALNHLAQTA PPEAAGRGRV AQLCLPPQSR 60 SEHRPRRGGG GPPPPPTPPR RAPFTSGAVR PLPTLPPPPP XVAAASGSRR LAAPIWTHEE 120 TLALIDAYRD KWYALRRGNL RASHWQEVAD DVARRCPSGP SPPKSSVQCR HKVEKLRKRY 180 RSERHKSLQL DPSLAPASSW VYFRKMDAME HGGGAVSGPR RPSASPSPAP PRPPSDDDEE 240 EEEEDDDDDY DGRRGTGGGS NTRSMHRLMA NGRGAIGELR FTIPKAVRSK LSRADDRPAP 300 SPNMNPNPTT RFFKGYTGSR PAMEEMRRKM EKKRRKRRME MESSAVREMV SALRMLGDGF 360 LRMEQKKMEM AREMEKVRME MELKRTELIL DSQRRIVDAF LKGFSGKKRT KVSPED

Sequence ? help Back to Top

Protein Sequence Length: 416 aa Download sequence

MGQPQSRCNN ENIGGCDWEG CKGKSCKWLS SALNHLAQTA PPEAAGRGRV AQLCLPPQSR  60
SEHRPRRGGG GPPPPPTPPR RAPFTSGAVR PLPTLPPPPP XVAAASGSRR LAAPIWTHEE  120
TLALIDAYRD KWYALRRGNL RASHWQEVAD DVARRCPSGP SPPKSSVQCR HKVEKLRKRY  180
RSERHKSLQL DPSLAPASSW VYFRKMDAME HGGGAVSGPR RPSASPSPAP PRPPSDDDEE  240
EEEEDDDDDY DGRRGTGGGS NTRSMHRLMA NGRGAIGELR FTIPKAVRSK LSRADDRPAP  300
SPNMNPNPTT RFFKGYTGSR PAMEEMRRKM EKKRRKRRME MESSAVREMV SALRMLGDGF  360
LRMEQKKMEM AREMEKVRME MELKRTELIL DSQRRIVDAF LKGFSGKKRT KVSPED

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	332	336	KKRRK
2	332	338	KKRRKRR
3	332	339	KKRRKRRM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G44730.1	2e-34	Trihelix family protein