PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW35053.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

GRAS

Protein Properties

Length: 532aa MW: 58971.5 Da PI: 5.0793

Description

GRAS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW35053.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GRAS	283.6	5.7e-87	215	467	2	256
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100 ++lL++cA a+s++++e+aq+++++l++++s +gdp qRlaay++e+Laar+a+s+ +lykal+++e + +s++l+a+++++ev+P++kf++++aN RWW35053.1 215 KQLLFDCAAAISQSSTEEAQTIITELRQMVSIQGDPPQRLAAYMVEGLAARIASSGRGLYKALKCKEPP---TSDRLSAMQILFEVCPCFKFGYMAANY 310 589***************************************************************9...9********************** PP GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvk 197 I eav+ + +vHiiDfd++qG Q+++L+q+L++ +++ p+lRi gv++pes+ l+ +g+rL+k+Ae lgvpfef++ +a ++ d+++e+L+++ RWW35053.1 311 IIAEAVKDDAKVHIIDFDLNQGSQYINLIQTLSTWARKRPRLRISGVDDPESVqrAVGGLKIIGRRLEKLAEDLGVPFEFRA-IAAKTGDITPEMLDCR 408 ***********************************************99878889*******************.69999******* PP GRAS 198 pgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFler 256 pgEal+Vn+++qlh+++desvs+ ++rd++L++vk+l Pk+v++veq++++n+++F+ r RWW35053.1 409 PGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMVKGLGPKLVTIVEQDMNTNTAPFFPR 467 ******************************************************988 PP
2	GRAS	52.3	1.1e-16	467	532	308	374
GRAS 308 rhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374 r e ++kWr+r+++aGF + p+s +++ ++++ll+ + ++ y+++ee g+l++gW+d++Lv++SaW+ RWW35053.1 467 RYEVAGKWRARMTMAGFVSCPFSANVNGSIQTLLKSYCDR-YKIKEEIGALYFGWEDKSLVVASAWK 532 78999*******************************66.***********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 532 aa Download sequence
MIRSADSSTA YGESNIYARK GGGDSSAISR QILSSDERMY TYRPTSYHSG LYSQQYLTNA 60 SSEMVHADPF HMSGSSIPRH YLQVSSAPYQ LMANIHSSII SENPYSSCFA AVQNPDSSAS 120 SNISHQTSHS LSDNLSPEQE IDYGEDEIRL KLQELERALL NDNDEDLVDS DQVMGIEDDW 180 AEPIKDLLLP SSPKESSADS SVSCVGSNRE PRTPKQLLFD CAAAISQSST EEAQTIITEL 240 RQMVSIQGDP PQRLAAYMVE GLAARIASSG RGLYKALKCK EPPTSDRLSA MQILFEVCPC 300 FKFGYMAANY IIAEAVKDDA KVHIIDFDLN QGSQYINLIQ TLSTWARKRP RLRISGVDDP 360 ESVQRAVGGL KIIGRRLEKL AEDLGVPFEF RAIAAKTGDI TPEMLDCRPG EALVVNFAFQ 420 LHHMPDESVS TVNQRDQLLR MVKGLGPKLV TIVEQDMNTN TAPFFPRYEV AGKWRARMTM 480 AGFVSCPFSA NVNGSIQTLL KSYCDRYKIK EEIGALYFGW EDKSLVVASA WK

Sequence ? help Back to Top

Protein Sequence Length: 532 aa Download sequence

MIRSADSSTA YGESNIYARK GGGDSSAISR QILSSDERMY TYRPTSYHSG LYSQQYLTNA  60
SSEMVHADPF HMSGSSIPRH YLQVSSAPYQ LMANIHSSII SENPYSSCFA AVQNPDSSAS  120
SNISHQTSHS LSDNLSPEQE IDYGEDEIRL KLQELERALL NDNDEDLVDS DQVMGIEDDW  180
AEPIKDLLLP SSPKESSADS SVSCVGSNRE PRTPKQLLFD CAAAISQSST EEAQTIITEL  240
RQMVSIQGDP PQRLAAYMVE GLAARIASSG RGLYKALKCK EPPTSDRLSA MQILFEVCPC  300
FKFGYMAANY IIAEAVKDDA KVHIIDFDLN QGSQYINLIQ TLSTWARKRP RLRISGVDDP  360
ESVQRAVGGL KIIGRRLEKL AEDLGVPFEF RAIAAKTGDI TPEMLDCRPG EALVVNFAFQ  420
LHHMPDESVS TVNQRDQLLR MVKGLGPKLV TIVEQDMNTN TAPFFPRYEV AGKWRARMTM  480
AGFVSCPFSA NVNGSIQTLL KSYCDRYKIK EEIGALYFGW EDKSLVVASA WK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	347	353	RKRPRLR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G21450.1	1e-171	GRAS family protein