PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RcHm_v2.0_Chr1g0318951
Organism
Rosa chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family bZIP
Protein Properties Length: 256aa    MW: 28432.8 Da    PI: 7.0711
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RcHm_v2.0_Chr1g0318951genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_129.22e-0981125650
                             HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                  bZIP_1   6 rerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 
                             r rr   NReA r++R++Kka ++ Le++vk+L+  N++L  +l+
  RcHm_v2.0_Chr1g0318951  81 RRRRPSGNREAVRKYREKKKAHTAYLEQEVKKLQVLNQQLVRKLQ 125
                             5677777*********************************98886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    
MDDGELETLD HDVFPKPNSF GNFQTSTSVD TFRTCLHTHT CNQPGPDAAH THTCYHTHTQ  60
VLPSEENDGA KSKEHSVLKP RRRRPSGNRE AVRKYREKKK AHTAYLEQEV KKLQVLNQQL  120
VRKLQGKASL EAEFLRLRNL LLDFRGKVDS ELGAFPFQKQ SYKTGAVFKE GDCELQSTVG  180
ETGLRCQTDL PCHCPPGVGL SLQARTDANG ETMVSFGGNC QPPVIDCREN PNGMASAEVE  240
NPHIAETLAS STTQDK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35040.12e-37bZIP family protein