PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RcHm_v2.0_Chr1g0325831

Organism

Rosa chinensis

Taxonomic ID

74649

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

bZIP

Protein Properties

Length: 333aa MW: 37174.7 Da PI: 8.9179

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RcHm_v2.0_Chr1g0325831	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	32.6	1.7e-10	44	87	2	45
XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 k+ k rr+++NReAAr+sR+RKka++++Le+ +L++ ++L RcHm_v2.0_Chr1g0325831 44 KDQKTLRRLAQNREAARKSRLRKKAYVQQLETSRLKLSQLEQEL 87 567899*************************9877777766655 PP

Sequence ? help Back to Top
Protein Sequence Length: 333 aa Download sequence
MADSPRTDIS TDVDTDDKNQ RYDRDQYAIT AAVSDSSDKS KDPKDQKTLR RLAQNREAAR 60 KSRLRKKAYV QQLETSRLKL SQLEQELQRA RQQGIFISSS GGDAAHSTSG NGAMAFDVEY 120 GRWLEDQNRQ INELRSAVNS HASDAELRII VDGILAHYDD IFRLKGTAAK ADVFHLLSGM 180 WKTPAERCFL WLGGFRSSEV LKLLVNQLEP LTEQQLMGIT NLQQSSQQAE DALSQGMEAL 240 QQSLAETLSS GSLGSTGSSG NVANYMGQMA MAMGKLGTLE GFIRQADNLR QQTLQQMHRI 300 LTTRQSARAL LAINDYFSRL RALSSLWLAR PRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G12250.1	1e-151	bZIP family protein