PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RcHm_v2.0_Chr1g0329321
Organism
Rosa chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family FAR1
Protein Properties Length: 155aa    MW: 17619.4 Da    PI: 9.4557
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RcHm_v2.0_Chr1g0329321genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR145.62.3e-1451924990
                    FAR1 49 ekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90
                               r++ra+tr gCka+++vk +k+gkw+++k+++eHnH+l+
  RcHm_v2.0_Chr1g0329321 51 GPVRKPRASTREGCKAMIHVKYDKSGKWVIAKFVKEHNHSLV 92
                            56799**********************************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 155 aa     Download sequence    
MKKEELIDCL GTIAQSGTSK FLTALKDLGA DNGLDDCLEE GHCVSIRGKF GPVRKPRAST  60
REGCKAMIHV KYDKSGKWVI AKFVKEHNHS LVVSPREARQ TMPDDKYEFS EPARIQSLVK  120
NYSQILVQLL TLWCKNLLSR SYQKMAWRLG YQGQE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43280.14e-39FAR1 family protein