PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RcHm_v2.0_Chr1g0330441
Organism
Rosa chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family bZIP
Protein Properties Length: 320aa    MW: 35632.3 Da    PI: 8.6234
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RcHm_v2.0_Chr1g0330441genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_149.87.3e-16250296552
                             CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                  bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleel 52 
                             +r++r++kNRe+A rsR+RK+a++ eLe+kv  Le+eN++L+k+ +el
  RcHm_v2.0_Chr1g0330441 250 RRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQ-KEL 296
                             79****************************************64.444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
MGIQTMGSQG GADGNCKQSQ FQPLTRQNSI YSLTLDEVQN QLGDLGKPLC SMNLDELLKS  60
VWSAEANQTM GMDIEGTAMV NQASLQRQAS LSLTSALSKK TVDEVWRDIQ QSKDNEEKRS  120
RERQPTLGEM TLEDFLVKAG VVAEASDKKN AGGPLVGVGP NVASQFPQGQ WLQYPQPQYQ  180
HPQQSMMGVY MPNQPIPPPM HVGAGAVMDV PYPDNQLAMP SPLMGALSDT QTPGRKRGNP  240
EDIVEKTVER RQKRMIKNRE SAARSRARKQ AYTNELENKV SRLEEENERL RKQKELEKVL  300
PSAPPPEPKY QLRRTTSAPF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56850.13e-95bZIP family protein