PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RcHm_v2.0_Chr1g0355141

Organism

Rosa chinensis

Taxonomic ID

74649

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

BES1

Protein Properties

Length: 701aa MW: 78424.7 Da PI: 5.7737

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RcHm_v2.0_Chr1g0355141	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	145.1	6.1e-45	78	213	1	130
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyr...kgskpl...eeaea 81 gg++r ++ +E+E++k RER+RRai+aki+aGLR++Gny+l++raD+n+V++AL+reAGwvv +DGtty+ +g +p ++a++ RcHm_v2.0_Chr1g0355141 78 GGARRCRPLEEKERTKIRERQRRAITAKILAGLRRHGNYNLRVRADINDVIAALAREAGWVVLPDGTTYPsnsQGPRPAgvsSTAAT 164 6899***************************************************************965566666676334444 PP DUF822 82 agssasaspesslqsslkssalaspvesysaspksssfpspssldsisl 130 ss+ +s++++++++ ++s+ +s ve+ + +ks+ +p++s +d s+ RcHm_v2.0_Chr1g0355141 165 SSSSQMMSQTTPVSLKGVTSSYQSSVEHNAGHMKSVFMPASSPYDLPSI 213 44555588999999888999999*****************9997665 PP

Sequence ? help Back to Top
Protein Sequence Length: 701 aa Download sequence
MATDMQRLIG TSEEDDEEEM DMDVKEEGDG DDDEDVEKHV DSTPMMIGVD GGMATSSCNN 60 NRFQQHQQMQ EVGTPGGGGA RRCRPLEEKE RTKIRERQRR AITAKILAGL RRHGNYNLRV 120 RADINDVIAA LAREAGWVVL PDGTTYPSNS QGPRPAGVSS TAATSSSSQM MSQTTPVSLK 180 GVTSSYQSSV EHNAGHMKSV FMPASSPYDL PSIITGDGGD QTQSHPLIGG SMDNVGDKQI 240 VDVPQKLPER DFANTAYIPV YVMLPLGVIN MKCELVDPDG LLKQLRVLKS VNVDGVMVDC 300 WWGIVEGHAP LEYNWNGYKR LFQMVRDLKL KLQVVMSFHE CGGNVGDDVC ITLPHWVAEI 360 GRSNPDIFFT DRAGRRNPEC LSWGIDKERV LRGRTAVEVY FDCMRSFRVE FDEFFQDGII 420 SMIQVGLGPC GELRFPSCTV KHGWRYPGIG EFQCYDQYLL KSLRKAAEAR GHSFWGRGPD 480 NAGSYNSRPH ESGFFCDGGD YDGYYGRFFL NWYSRILVDH GDRVLSLAKL AFDGTCIAAK 540 LSGIHWWYKT PSHAAELTAG FYNPCNRDGY AAIMMMLKKH GASLNLVCTQ LHMLDQNIDF 600 QEAMGDPEGL FWQVLNAAWD VCVPVSSENA LLCENALLCH SRVGYNKILD NSKPLTDPDG 660 RHLSSFTYLR LSPLLMERHN FMEFDRFVKR MHGEAVLDLH V

Sequence ? help Back to Top

Protein Sequence Length: 701 aa Download sequence

MATDMQRLIG TSEEDDEEEM DMDVKEEGDG DDDEDVEKHV DSTPMMIGVD GGMATSSCNN  60
NRFQQHQQMQ EVGTPGGGGA RRCRPLEEKE RTKIRERQRR AITAKILAGL RRHGNYNLRV  120
RADINDVIAA LAREAGWVVL PDGTTYPSNS QGPRPAGVSS TAATSSSSQM MSQTTPVSLK  180
GVTSSYQSSV EHNAGHMKSV FMPASSPYDL PSIITGDGGD QTQSHPLIGG SMDNVGDKQI  240
VDVPQKLPER DFANTAYIPV YVMLPLGVIN MKCELVDPDG LLKQLRVLKS VNVDGVMVDC  300
WWGIVEGHAP LEYNWNGYKR LFQMVRDLKL KLQVVMSFHE CGGNVGDDVC ITLPHWVAEI  360
GRSNPDIFFT DRAGRRNPEC LSWGIDKERV LRGRTAVEVY FDCMRSFRVE FDEFFQDGII  420
SMIQVGLGPC GELRFPSCTV KHGWRYPGIG EFQCYDQYLL KSLRKAAEAR GHSFWGRGPD  480
NAGSYNSRPH ESGFFCDGGD YDGYYGRFFL NWYSRILVDH GDRVLSLAKL AFDGTCIAAK  540
LSGIHWWYKT PSHAAELTAG FYNPCNRDGY AAIMMMLKKH GASLNLVCTQ LHMLDQNIDF  600
QEAMGDPEGL FWQVLNAAWD VCVPVSSENA LLCENALLCH SRVGYNKILD NSKPLTDPDG  660
RHLSSFTYLR LSPLLMERHN FMEFDRFVKR MHGEAVLDLH V

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45880.1	0.0	BES1 family protein