PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RcHm_v2.0_Chr1g0358601

Organism

Rosa chinensis

Taxonomic ID

74649

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

bZIP

Protein Properties

Length: 427aa MW: 45913.2 Da PI: 9.2466

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RcHm_v2.0_Chr1g0358601	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	67.2	2.8e-21	285	347	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elkrerrkq+NRe+ArrsR+RK+ae++eL++kv++L a N +Lk+e+++l++ +++l+ e+ RcHm_v2.0_Chr1g0358601 285 ERELKRERRKQSNRESARRSRLRKQAETDELARKVEALNADNVSLKSEINRLTESSDRLRVEN 347 89********************************************************99987 PP

Sequence ? help Back to Top
Protein Sequence Length: 427 aa Download sequence
MGNNDEVKSV KTEKSSPPLT ADPKNHTNQT NIHVYPDWAA MQAYYGPRLP MPPYYNAPAA 60 SGHAPHPYMW GPPQTMMSPY GAPYAAIYSH GSVYAHPAVP LSSNGQGVPL SPAAANPSSM 120 ETPTKSSGNN DRGLVKKPKG FDALEMSIGN GNAENAEGGA DQSLSKSSAT EGSSSDGNTS 180 GANQTRRKRT REGTPTTVEA IAGDQKPEMQ ASLASAKDVN PASYKALGTT IATVGVPGKL 240 VRPAVSPGVT NVLELKNSSN LNLTSATSVE QPSAVLPPET WLQNERELKR ERRKQSNRES 300 ARRSRLRKQA ETDELARKVE ALNADNVSLK SEINRLTESS DRLRVENASL MEKLKKARVG 360 RMEEIIMKID DNRVEAISTE NLLSRVNNSG ALARDVEEEG SMYEKNAGAK LHQLLDASPR 420 TDAIVAS

Sequence ? help Back to Top

Protein Sequence Length: 427 aa Download sequence

MGNNDEVKSV KTEKSSPPLT ADPKNHTNQT NIHVYPDWAA MQAYYGPRLP MPPYYNAPAA  60
SGHAPHPYMW GPPQTMMSPY GAPYAAIYSH GSVYAHPAVP LSSNGQGVPL SPAAANPSSM  120
ETPTKSSGNN DRGLVKKPKG FDALEMSIGN GNAENAEGGA DQSLSKSSAT EGSSSDGNTS  180
GANQTRRKRT REGTPTTVEA IAGDQKPEMQ ASLASAKDVN PASYKALGTT IATVGVPGKL  240
VRPAVSPGVT NVLELKNSSN LNLTSATSVE QPSAVLPPET WLQNERELKR ERRKQSNRES  300
ARRSRLRKQA ETDELARKVE ALNADNVSLK SEINRLTESS DRLRVENASL MEKLKKARVG  360
RMEEIIMKID DNRVEAISTE NLLSRVNNSG ALARDVEEEG SMYEKNAGAK LHQLLDASPR  420
TDAIVAS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	302	308	RRSRLRK
2	302	309	RRSRLRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46270.1	1e-111	bZIP family protein