PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RcHm_v2.0_Chr1g0361571
Organism
Rosa chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family NAC
Protein Properties Length: 75aa    MW: 8686.91 Da    PI: 5.9664
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RcHm_v2.0_Chr1g0361571genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM35.33.3e-11857151
                     NAM  1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkv 51
                            +ppG+rFhPtde l+++ L+ k + k+ e  ++i+ ++++k+eP++Lp + 
  RcHm_v2.0_Chr1g0361571  8 VPPGYRFHPTDERLLSD-LEDKNQCKDSENPTTIPVIEMCKHEPHELPDRR 57
                            69*************76.999999999888889**************9432 PP
Sequence ? help Back to Top
Protein Sequence    Length: 75 aa     Download sequence    
MSCGDFIVPP GYRFHPTDER LLSDLEDKNQ CKDSENPTTI PVIEMCKHEP HELPDRRERG  60
GVKILHHQCQ VCIFV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15170.19e-09NAC family protein