PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RcHm_v2.0_Chr1g0366891
Organism
Rosa chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family FAR1
Protein Properties Length: 110aa    MW: 12677.3 Da    PI: 4.7786
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RcHm_v2.0_Chr1g0366891genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR121.76.5e-074980233
                    FAR1  2 fYneYAkevGFsvrkskskkskrngeitkrtf 33
                            fY +YAk vGF+vrk+ +++s+r+g++t r++
  RcHm_v2.0_Chr1g0366891 49 FYYAYAKVVGFDVRKDDKRTSTRTGRVTIRRW 80
                            9********************99999987765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 110 aa     Download sequence    
MSDSNLQEHS LEAKNDINQL EYDGIRYDKL APEDLIGLMF ETVEAAEAFY YAYAKVVGFD  60
VRKDDKRTST RTGRVTIRRW GTYAKEIDKV SLPMFVQGKV LEREELVCCS