PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RcHm_v2.0_Chr1g0370761

Organism

Rosa chinensis

Taxonomic ID

74649

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

G2-like

Protein Properties

Length: 369aa MW: 40884 Da PI: 9.8455

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RcHm_v2.0_Chr1g0370761	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	100.2	1.3e-31	77	130	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 rlrWtp+LH +F++ave+LGG+e+AtPk +l+lm+vkgL+++hvkSHLQ+YR+ RcHm_v2.0_Chr1g0370761 77 SRLRWTPDLHLCFIHAVERLGGQERATPKLVLQLMNVKGLSIAHVKSHLQMYRS 130 69***************************************************7 PP
2	Myb_DNA-binding	50.7	4e-16	78	129	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+++++ +++av++lGg t+k++ + m+ kg++ ++ks++q+y+ RcHm_v2.0_Chr1g0370761 78 RLRWTPDLHLCFIHAVERLGGQeraTPKLVLQLMNvKGLSIAHVKSHLQMYR 129 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 369 aa Download sequence
MKISSEGTSQ ASKASLSSSS QSKKERGDDE EVLDKDSQQQ PSSKNGVSSS SSTIEENEKS 60 KGASGGSVRQ YVRSKTSRLR WTPDLHLCFI HAVERLGGQE RATPKLVLQL MNVKGLSIAH 120 VKSHLQMYRS KKMEDPNQVL SEQGFYIEGG DNHIYNLTQL SVLQSFNHQW PSSGLRYGAD 180 ASWSGRHDDH HHQIYSPYSN TGRTQLFDHH NTRVTGLYGS VAERIFGSNN TSTSTTTTTA 240 TTSNNIQSHT THIPSTWRSR HQISTRVHNE VRPFNRQSWQ DHSWLDNSIA TRNTLKRKAP 300 DSSDNTSNLD LNLSLKVPAT EEKVLGFGLS LSLSPASASS KLGLMKKLEG NGGHDREHGT 360 KTSTLDLTL

Sequence ? help Back to Top

Protein Sequence Length: 369 aa Download sequence

MKISSEGTSQ ASKASLSSSS QSKKERGDDE EVLDKDSQQQ PSSKNGVSSS SSTIEENEKS  60
KGASGGSVRQ YVRSKTSRLR WTPDLHLCFI HAVERLGGQE RATPKLVLQL MNVKGLSIAH  120
VKSHLQMYRS KKMEDPNQVL SEQGFYIEGG DNHIYNLTQL SVLQSFNHQW PSSGLRYGAD  180
ASWSGRHDDH HHQIYSPYSN TGRTQLFDHH NTRVTGLYGS VAERIFGSNN TSTSTTTTTA  240
TTSNNIQSHT THIPSTWRSR HQISTRVHNE VRPFNRQSWQ DHSWLDNSIA TRNTLKRKAP  300
DSSDNTSNLD LNLSLKVPAT EEKVLGFGLS LSLSPASASS KLGLMKKLEG NGGHDREHGT  360
KTSTLDLTL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40260.1	1e-46	G2-like family protein