PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RcHm_v2.0_Chr1g0379201
Organism
Rosa chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family FAR1
Protein Properties Length: 101aa    MW: 11729.4 Da    PI: 9.5856
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RcHm_v2.0_Chr1g0379201genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR136.12.2e-114686242
                    FAR1  2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkre 42
                            fY +YA  +GF vr+ +sk+s+  +e+++++f C+++g++ 
  RcHm_v2.0_Chr1g0379201 46 FYTKYAPAAGFVVRIGSSKRSRAINEFIRKEFFCNRQGNSP 86
                            9*************************************875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 101 aa     Download sequence    
METEPIQAIP PSEENVSTSA FYPQIRNELK PFKGQQFKTW EEAHVFYTKY APAAGFVVRI  60
GSSKRSRAIN EFIRKEFFCN RQGNSPIELT ENKLKLLMVW S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G15090.14e-11FAR1 family protein