PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RcHm_v2.0_Chr1g0379361
Organism
Rosa chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family FAR1
Protein Properties Length: 91aa    MW: 10500 Da    PI: 7.5295
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RcHm_v2.0_Chr1g0379361genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR121.38.7e-075788233
                    FAR1  2 fYneYAkevGFsvrkskskkskrngeitkrtf 33
                            fY +YA  +GF vr+ +sk+s+  +e+++++f
  RcHm_v2.0_Chr1g0379361 57 FYTKYAPAAGFVVRIGSSKRSRAINEFIRKEF 88
                            9**********************999*99998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 91 aa     Download sequence    
METNGIIVPT EMETEPIQAI PPSEENVSTS AFYPQIRNEL KPFKGQQFKT WEEAHVFYTK  60
YAPAAGFVVR IGSSKRSRAI NEFIRKEFFL Q
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G15090.14e-08FAR1 family protein