PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RcHm_v2.0_Chr2g0098731
Organism
Rosa chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family bZIP
Protein Properties Length: 225aa    MW: 24907.4 Da    PI: 9.5117
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RcHm_v2.0_Chr2g0098731genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.24.7e-10193217428
                             XCHHHCHHHHHHHHHHHHHHHHHHH CS
                  bZIP_1   4 lkrerrkqkNReAArrsRqRKkaei 28 
                             ++r +r++kNRe+A rsR+RK++++
  RcHm_v2.0_Chr2g0098731 193 DRRHKRMIKNRESAARSRARKQEYC 217
                             6899********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    
MLSSTGSEES NYNSSSWSSP TTTPASPFSQ ATPRRTMEEV WKDINLASLS DSNNSLNNNP  60
NFRNMTLQDF LARPFGNVVS PRPEHHHHHH TTRNSPPPPQ AVMPSPATVL SLNHLSSDQF  120
QLFCLENLNT SPIVNINHPN SSTVSDNSFS GAYPFEGLGN QSSPSSGLVM PSGFGVGKKR  180
LPESDRSNFG GGDRRHKRMI KNRESAARSR ARKQEYCCPY NSQKY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35900.12e-12bZIP family protein