PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RcHm_v2.0_Chr2g0099771

Organism

Rosa chinensis

Taxonomic ID

74649

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

DBB

Protein Properties

Length: 187aa MW: 20659.3 Da PI: 6.9622

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RcHm_v2.0_Chr2g0099771	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	22.6	2.1e-07	4	33	5	34
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeH 34 C+ +e+ ++ fC ++ lC+ C ++ H RcHm_v2.0_Chr2g0099771 4 LCDACESAAAIVFCAADEAALCRACDEKVH 33 7**************************998 PP
2	zf-B_box	27.1	8.9e-09	53	91	3	37
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg....H 37 ++C+ +e+ ++ ++Ce +++ lC +C + H g H RcHm_v2.0_Chr2g0099771 53 VPRCDICENAPAFFYCEIDGSSLCLQCDMVVHVGgkrtH 91 689**************************9996545555 PP

Sequence ? help Back to Top
Protein Sequence Length: 187 aa Download sequence
MRTLCDACES AAAIVFCAAD EAALCRACDE KVHLCNKLAS RHVRVGLATP SAVPRCDICE 60 NAPAFFYCEI DGSSLCLQCD MVVHVGGKRT HGRYLVLRQR VEFPGDKPSS NGEDPASQPP 120 IDQGETRRVQ HQQPRMTIGE NHQNHRASPI RLADANDDGH VKMDNKLIDL NMKPNRMHGQ 180 ASNKEDQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38960.1	4e-77	DBB family protein