PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RcHm_v2.0_Chr2g0100571
Organism
Rosa chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family bZIP
Protein Properties Length: 156aa    MW: 17693.9 Da    PI: 4.7755
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RcHm_v2.0_Chr2g0100571genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1414.1e-133391563
                            CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                  bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
                            ++ +r+ +NRe+ArrsR RK++ +  L+  v  L +eN +    ++  ++++ +l++e+
  RcHm_v2.0_Chr2g0100571 33 RKRKRMVSNRESARRSRMRKQEHLTDLTAQVGLLMKENNQILTSINVTNQLYLNLEAEN 91
                            678999****************************************9999999999876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 156 aa     Download sequence    
MATSSGNSSG SSALQIMNSG SDQEGLHQVM DQRKRKRMVS NRESARRSRM RKQEHLTDLT  60
AQVGLLMKEN NQILTSINVT NQLYLNLEAE NCVLRAQMAE LSNRLQSLND ILDYIDSSKW  120
LLENEEEDLS AQFGGDGFLN PWSNLCFNQP VDMFMC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14653RRSRMRKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75390.12e-40bZIP family protein