PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RcHm_v2.0_Chr2g0102191

Organism

Rosa chinensis

Taxonomic ID

74649

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

bZIP

Protein Properties

Length: 342aa MW: 35865.4 Da PI: 6.8849

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RcHm_v2.0_Chr2g0102191	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	73.5	3.1e-23	250	312	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elkr++rkq+NRe+ArrsR+RK+ae+eeL++ v+ L++eN+ Lk+el++l++e++kl se+ RcHm_v2.0_Chr2g0102191 250 ERELKRQKRKQSNRESARRSRLRKQAECEELQKSVQGLTNENHGLKDELQRLSQECEKLVSEN 312 89*********************************************************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 342 aa Download sequence
MGTGEEGTPS KPSKQASTAQ EIPTQPSYPD WSSSMQAYYG AGAAPPPFFA SSVASPAPHP 60 YMWGAQHPMM PPYGTPVPYP AIYPPGGVYA HPGMVTTPTS VPPTNPESEG KGADGKERAS 120 AKKPKGAAGN TVKAGESGKA TSGSGNDGAS QSAESGSEGS SDGSEENGNH QEYGANKKGS 180 FDKMLADGAN AQNNTALVPG KPVVSMPATS LNMGMDLWNA SPASAGTAKM RGNQSGAPSA 240 VGGDHWIQDE RELKRQKRKQ SNRESARRSR LRKQAECEEL QKSVQGLTNE NHGLKDELQR 300 LSQECEKLVS ENTSIKEELT RLCGPNLVAN IEHQSRGGEG NS

Sequence ? help Back to Top

Protein Sequence Length: 342 aa Download sequence

MGTGEEGTPS KPSKQASTAQ EIPTQPSYPD WSSSMQAYYG AGAAPPPFFA SSVASPAPHP  60
YMWGAQHPMM PPYGTPVPYP AIYPPGGVYA HPGMVTTPTS VPPTNPESEG KGADGKERAS  120
AKKPKGAAGN TVKAGESGKA TSGSGNDGAS QSAESGSEGS SDGSEENGNH QEYGANKKGS  180
FDKMLADGAN AQNNTALVPG KPVVSMPATS LNMGMDLWNA SPASAGTAKM RGNQSGAPSA  240
VGGDHWIQDE RELKRQKRKQ SNRESARRSR LRKQAECEEL QKSVQGLTNE NHGLKDELQR  300
LSQECEKLVS ENTSIKEELT RLCGPNLVAN IEHQSRGGEG NS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	267	273	RRSRLRK
2	267	274	RRSRLRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36730.1	8e-84	bZIP family protein