PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RcHm_v2.0_Chr2g0102631
Organism
Rosa chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family BES1
Protein Properties Length: 315aa    MW: 34749.6 Da    PI: 9.9049
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RcHm_v2.0_Chr2g0102631genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822159.32.6e-49580176
                  DUF822  1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl 76
                            g+sgr ptwkErEnnkrRERrRRaiaakiy+GLRaqG yklpk++DnneVlkALc+eAGwvve+DGttyrk  + +
  RcHm_v2.0_Chr2g0102631  5 GSSGRLPTWKERENNKRRERRRRAIAAKIYSGLRAQGSYKLPKHCDNNEVLKALCAEAGWVVEEDGTTYRKRLHSH 80
                            689*******************************************************************976554 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MTGGGSSGRL PTWKERENNK RRERRRRAIA AKIYSGLRAQ GSYKLPKHCD NNEVLKALCA  60
EAGWVVEEDG TTYRKRLHSH KYECVFIYAT KPTILIFPKS CAVIPCQSII VLLSQPNSFR  120
WKPLLLPSKP SSYLLPFLHN LASIPTNLPP LRISNSAPVT PPLSSPTSRG SKRKPDWESL  180
TNGCINSLRH PLFAASAPSS PTRRHHLAPA TIPECDESDA STVDSGRWVS FQTGVPSVAP  240
PSPTFNLMKP VAEQNVLQQT VVGNGGIGWG NPVERARGSE FEFESGRLKA WEGERIHEVG  300
VEDLELTLGN GKMHT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75080.21e-76BES1 family protein