PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RcHm_v2.0_Chr2g0108691

Organism

Rosa chinensis

Taxonomic ID

74649

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

bZIP

Protein Properties

Length: 208aa MW: 23855 Da PI: 10.4502

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RcHm_v2.0_Chr2g0108691	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	36.8	8.6e-12	105	149	5	49
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49 ++ rr+++NRe+ArrsR RK++ ie+L++ v L eN++L ++l RcHm_v2.0_Chr2g0108691 105 RKRRRMISNRESARRSRMRKQKHIENLRTQVNRLRIENRELNNRL 149 5789**********************************9998765 PP

Sequence ? help Back to Top
Protein Sequence Length: 208 aa Download sequence
MLSTIPAMLP SETLLHFPAF DPGFNPGGFT PWESELCPAI KYSPKPVISN PSSDADQTPS 60 PNPVISSSGS DDDPNRPGRS GPDHAKSCPI NGSKRTVSVS PVDERKRRRM ISNRESARRS 120 RMRKQKHIEN LRTQVNRLRI ENRELNNRLR FVIYHFQRVH TDNDMLRAEH TMLQQKLSDI 180 RQILVFRQLQ HMSSAWPCDT VITEQTHH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	105	109	RKRRR
2	105	126	RKRRRMISNRESARRSRMRKQK
3	118	125	RRSRMRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22850.1	1e-24	bZIP family protein