PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RcHm_v2.0_Chr2g0121171
Organism
Rosa chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family HB-other
Protein Properties Length: 189aa    MW: 20522.4 Da    PI: 4.429
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RcHm_v2.0_Chr2g0121171genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox17.85.5e-063161334
                            --SS--HHHHHHHHHHHHHSSS--HHHHHHHH CS
                Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLA 34
                            +R+t+t++ql++L+el++ +++++a+er++L 
  RcHm_v2.0_Chr2g0121171 31 NRWTPTPDQLRILQELYY-DKNLKARERQKLR 61
                            7****************8.5789999999985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    
MELQAQQPTE EGGSIQAAGS SANTPIRPTN NRWTPTPDQL RILQELYYDK NLKARERQKL  60
REFRNVRVGG SLDLNFGSTS STDDGRSIDL NFGSTGSTST DRSIDLNFGS CVGYGVDGSI  120
MKQRGEYHQE IETLPLFPMH GENVLGNPKT TSEEGSAYGW YSGGWDDNNG GSCISLELSL  180
NSSGAADMA