PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RcHm_v2.0_Chr2g0128811

Organism

Rosa chinensis

Taxonomic ID

74649

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

bZIP

Protein Properties

Length: 335aa MW: 37629.4 Da PI: 6.4494

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RcHm_v2.0_Chr2g0128811	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	33.3	1.1e-10	199	242	5	48
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 kr +r NR +A+rsR RK+++i eLe+ v +L+ae + L + RcHm_v2.0_Chr2g0128811 199 KRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPR 242 8999********************************98877655 PP

Sequence ? help Back to Top
Protein Sequence Length: 335 aa Download sequence
MAQLPPKVPN MTPSWPDFSH QKMSCFAPTG GNNGNAASQN PCWVDEFLDF SSARRGSHRR 60 SVSDSITFLE APMQHECRAS GAPPEPNNNN NSHHVHEFDR FDDEQFMSMF TTDEIAAAAA 120 AGPTGSCSNP STPSDHNSIN DDDEHQQQQQ LDDGDKKKRE LKHESEEAES ECKLEAQQTQ 180 NGDRNASKNT TGDRKIDPKR VKRILANRQS AQRSRVRKLQ YISELERSVT SLQAEVSVLS 240 PRVAFLDHQR LLLNVDNSAL KQRIAALAQD KIFKDAHQEA LKREIERLRQ VYHQQNLKKM 300 NNNNIEQSPN SDTITAQHPD AAAADQKEQL LNVSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G58120.1	1e-112	bZIP family protein