PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RcHm_v2.0_Chr2g0129951

Organism

Rosa chinensis

Taxonomic ID

74649

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

G2-like

Protein Properties

Length: 163aa MW: 18220.3 Da PI: 7.1649

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RcHm_v2.0_Chr2g0129951	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	97.6	8.9e-31	90	143	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWt++LH +F++ave++GG+e+AtPk +l+lm+v gL+++hvkSHLQ+YR+ RcHm_v2.0_Chr2g0129951 90 PRLRWTSDLHLAFIHAVERIGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRS 143 8****************************************************7 PP
2	Myb_DNA-binding	46.1	1.2e-14	91	142	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT ++++ +++av++ Gg t+k++ + m+ g++ ++ks++q+y+ RcHm_v2.0_Chr2g0129951 91 RLRWTSDLHLAFIHAVERIGGQeraTPKLVLQLMNvRGLSIAHVKSHLQMYR 142 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 163 aa Download sequence
MADPEMIEIS VEADDDQSTT DGSKDFRSKS SSPKASCLFF DLNEDATSDD HGDVSKNIGE 60 ARESKTSTEG KEQTATSSGA VRQYVRSKMP RLRWTSDLHL AFIHAVERIG GQERATPKLV 120 LQLMNVRGLS IAHVKSHLQM YRSKKLDESG QGKFREPRHA PWN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	3e-38	G2-like family protein