PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RcHm_v2.0_Chr2g0139441
Organism
Rosa chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family HB-other
Protein Properties Length: 59aa    MW: 6759.59 Da    PI: 7.3514
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RcHm_v2.0_Chr2g0139441genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox24.54.8e-082158237
                            T--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC CS
                Homeobox  2 rkRttftkeqleeLeelFek..nrypsaeereeLAkkl 37
                            ++R+++t+ ql++L+ l++    +yp+ e+++e+  +l
  RcHm_v2.0_Chr2g0139441 21 SNRWAPTPPQLRILKGLYYDkgFKYPTPEQIQEICLHL 58
                            58****************96569**********98766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 59 aa     Download sequence    
MEQQTQQQIE DGGNNQAAGS SNRWAPTPPQ LRILKGLYYD KGFKYPTPEQ IQEICLHLK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17950.17e-09WOX family protein