PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RcHm_v2.0_Chr2g0147241
Organism
Rosa chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family HB-other
Protein Properties Length: 84aa    MW: 9581.94 Da    PI: 4.9238
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RcHm_v2.0_Chr2g0147241genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox15.72.5e-054782336
                            --SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHH CS
                Homeobox  3 kRttftkeqleeLeelFek..nrypsaeereeLAkk 36
                            +R+t t++ql++L+ l++    + p+  +++e+  +
  RcHm_v2.0_Chr2g0147241 47 NRWTSTPDQLRILQVLYYDkvLKCPTPVQIQEICLN 82
                            7****************96579999999*9999655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 84 aa     Download sequence    
MEPRTLQLME LRTQQQMELQ AQQPTEEGGS IQAAGSSANT PIRPTNNRWT STPDQLRILQ  60
VLYYDKVLKC PTPVQIQEIC LNLQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17950.19e-08WOX family protein