PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RcHm_v2.0_Chr2g0155181

Organism

Rosa chinensis

Taxonomic ID

74649

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

G2-like

Protein Properties

Length: 121aa MW: 13748.3 Da PI: 6.0062

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RcHm_v2.0_Chr2g0155181	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	103.2	1.6e-32	44	98	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k rlrW+ +LH++Fv+av qLGG++kAtPk+i+++m+vkgL+l hvkSHLQkYRl RcHm_v2.0_Chr2g0155181 44 KSRLRWSADLHASFVDAVYQLGGPHKATPKSIMQIMDVKGLSLFHVKSHLQKYRL 98 68****************************************************8 PP
2	Myb_DNA-binding	54.7	2.4e-17	46	97	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rW+++++ +vdav qlGg+ t+k+I++ m kg++l ++ks++qky+ RcHm_v2.0_Chr2g0155181 46 RLRWSADLHASFVDAVYQLGGPhkaTPKSIMQIMDvKGLSLFHVKSHLQKYR 97 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 121 aa Download sequence
MDRGVVEGEE EEEEEEQEEN SSDHSSSQIE PVALPYVPSS YKLKSRLRWS ADLHASFVDA 60 VYQLGGPHKA TPKSIMQIMD VKGLSLFHVK SHLQKYRLGK YGVKEWRDGS SSRTGMTDRS 120 Y

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G13640.1	8e-28	G2-like family protein