PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RcHm_v2.0_Chr2g0157441

Organism

Rosa chinensis

Taxonomic ID

74649

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

bZIP

Protein Properties

Length: 428aa MW: 46974 Da PI: 6.3261

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RcHm_v2.0_Chr2g0157441	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	33.5	8.9e-11	224	282	5	63
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 kr++r NR +A rs +RK +i+eLe+kv++L++e ++L +l l+ l+se+ RcHm_v2.0_Chr2g0157441 224 KRAKRIWANRQSAARSKERKMRYIAELEQKVQTLQTEATSLSAQLTLLQRDTNGLTSEN 282 9***********************************************99999999887 PP

Sequence ? help Back to Top
Protein Sequence Length: 428 aa Download sequence
MDKDKSPAHG GGLPPPSGRY SSLLPTYNVK TEPSSSSSFP PLASGATAEP GHFGHGMSTE 60 SNHFSHDISR MPDYPPRKLG HRRAHSEIVT LPDDISFDSD LGVVGGADGP SFSDETEEDL 120 LSMYLDMDKF NSSSATSDFQ VGEPSASAAP AAPATRALTS STENISMGTH ERPRVRHQHS 180 QSMDGSTTIK TEMLVSSSEE MSAADSKKAM SATKLSELAL VDPKRAKRIW ANRQSAARSK 240 ERKMRYIAEL EQKVQTLQTE ATSLSAQLTL LQRDTNGLTS ENSELKLRLQ TMEQQVHLQD 300 ALNDALKEEI QHLKVLTGQA MPNGGPMMNF ASFGAGPSAG QQFYPNNQAM HTLLTAQQFQ 360 QLQIHSQKQQ HQFQQHLLHQ LQQQHMQQQQ QQQQQQQQSE DLKTGATVQS PSLNDNASEV 420 NQTVAKDC

Sequence ? help Back to Top

Protein Sequence Length: 428 aa Download sequence

MDKDKSPAHG GGLPPPSGRY SSLLPTYNVK TEPSSSSSFP PLASGATAEP GHFGHGMSTE  60
SNHFSHDISR MPDYPPRKLG HRRAHSEIVT LPDDISFDSD LGVVGGADGP SFSDETEEDL  120
LSMYLDMDKF NSSSATSDFQ VGEPSASAAP AAPATRALTS STENISMGTH ERPRVRHQHS  180
QSMDGSTTIK TEMLVSSSEE MSAADSKKAM SATKLSELAL VDPKRAKRIW ANRQSAARSK  240
ERKMRYIAEL EQKVQTLQTE ATSLSAQLTL LQRDTNGLTS ENSELKLRLQ TMEQQVHLQD  300
ALNDALKEEI QHLKVLTGQA MPNGGPMMNF ASFGAGPSAG QQFYPNNQAM HTLLTAQQFQ  360
QLQIHSQKQQ HQFQQHLLHQ LQQQHMQQQQ QQQQQQQQSE DLKTGATVQS PSLNDNASEV  420
NQTVAKDC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G06070.1	1e-143	bZIP family protein