PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RcHm_v2.0_Chr3g0451141

Organism

Rosa chinensis

Taxonomic ID

74649

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

bZIP

Protein Properties

Length: 427aa MW: 46212.8 Da PI: 5.2173

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RcHm_v2.0_Chr3g0451141	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	47.7	3.4e-15	230	287	3	60
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60 + kr rr+ +NRe+ArrsR+RK+a + eLe+ + +L eN++L k+l +++++ + RcHm_v2.0_Chr3g0451141 230 DAKRVRRMLSNRESARRSRRRKQAHLTELETQASQLRVENSSLLKRLTDINQKYNEAS 287 579********************************************99999988765 PP

Sequence ? help Back to Top
Protein Sequence Length: 427 aa Download sequence
MDRVFSSMGE MSDHLWSSSS SCAPVPPGTN VNEDEDELSK MNRSASEWAF QRFLQQEASV 60 SPSSSSQAQN DVEETKVNAT SMALPNGQNP TNTNSSAASF KAPNVPVDSE EYQAFLKTKL 120 DLACAAVALS RVKGSLVKAQ DSASLADSGQ QASDALQLGS QAPFEGAGND LCRSYDKNAT 180 APLGIPSLPT IQSRSGASIR QATSASSREL SDYEEVEGET AMTENMDPTD AKRVRRMLSN 240 RESARRSRRR KQAHLTELET QASQLRVENS SLLKRLTDIN QKYNEASVDN RVLRADIETL 300 RAKVKMAEET VKRLTGSNSV FHTMSDVSSI SMAPFDGSPS ETSADAAVPV QDDPNHHYFQ 360 PASNNSMPTD FRGNNGLADN TPSVENAQQT SAATSKEVVG NKMGRTLSLP RVASLEHLQK 420 RIRGGEQ

Sequence ? help Back to Top

Protein Sequence Length: 427 aa Download sequence

MDRVFSSMGE MSDHLWSSSS SCAPVPPGTN VNEDEDELSK MNRSASEWAF QRFLQQEASV  60
SPSSSSQAQN DVEETKVNAT SMALPNGQNP TNTNSSAASF KAPNVPVDSE EYQAFLKTKL  120
DLACAAVALS RVKGSLVKAQ DSASLADSGQ QASDALQLGS QAPFEGAGND LCRSYDKNAT  180
APLGIPSLPT IQSRSGASIR QATSASSREL SDYEEVEGET AMTENMDPTD AKRVRRMLSN  240
RESARRSRRR KQAHLTELET QASQLRVENS SLLKRLTDIN QKYNEASVDN RVLRADIETL  300
RAKVKMAEET VKRLTGSNSV FHTMSDVSSI SMAPFDGSPS ETSADAAVPV QDDPNHHYFQ  360
PASNNSMPTD FRGNNGLADN TPSVENAQQT SAATSKEVVG NKMGRTLSLP RVASLEHLQK  420
RIRGGEQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	245	252	RRSRRRKQ
2	247	252	SRRRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28770.2	2e-75	bZIP family protein