PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RcHm_v2.0_Chr3g0462991

Organism

Rosa chinensis

Taxonomic ID

74649

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

G2-like

Protein Properties

Length: 130aa MW: 14857.1 Da PI: 10.3354

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RcHm_v2.0_Chr3g0462991	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	103.6	1.2e-32	14	68	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+rlrWt+eLH+ Fveav++LGG+++AtPk il++m+v+gLt++h+kSHLQkYR+ RcHm_v2.0_Chr3g0462991 14 KERLRWTQELHDMFVEAVTKLGGPDRATPKGILKAMGVPGLTIYHIKSHLQKYRI 68 68****************************************************7 PP
2	Myb_DNA-binding	62.8	6.7e-20	16	67	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e+++ +v+av++lGg+ t+k I + mg g+t +++ks++qky+ RcHm_v2.0_Chr3g0462991 16 RLRWTQELHDMFVEAVTKLGGPdraTPKGILKAMGvPGLTIYHIKSHLQKYR 67 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 130 aa Download sequence
MDSKKCLDAS AGNKERLRWT QELHDMFVEA VTKLGGPDRA TPKGILKAMG VPGLTIYHIK 60 SHLQKYRISK FVPETTSSNL QRKNISEILP NFGTTSAAQL NEALHLMHIQ VQRRLSDQLE 120 VYTRSYRNYK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01060.1	3e-40	G2-like family protein