PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RcHm_v2.0_Chr3g0473591
Organism
Rosa chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family MYB_related
Protein Properties Length: 46aa    MW: 5129.76 Da    PI: 7.516
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RcHm_v2.0_Chr3g0473591genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding23.11.8e-071445131
                            TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHH CS
         Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg.tWktIartm 31
                            +g W+ eEde l+ + + +G+g +W   +++ 
  RcHm_v2.0_Chr3g0473591 14 KGQWSLEEDEALKTYLETHGTGgNWIHLPQKA 45
                            799*******************9998777766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 46 aa     Download sequence    
MGRAPYCDKA NVKKGQWSLE EDEALKTYLE THGTGGNWIH LPQKAG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49690.13e-20MYB family protein