PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RcHm_v2.0_Chr3g0476411
Organism
Rosa chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family bZIP
Protein Properties Length: 198aa    MW: 22608.3 Da    PI: 8.8547
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RcHm_v2.0_Chr3g0476411genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_148.32.3e-15105163563
                             CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                  bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                             kr +r+++NRe+ArrsR RKk++ieeL+  v++L   N++L ++l +l +  ++  +e+
  RcHm_v2.0_Chr3g0476411 105 KRIKRMISNRESARRSRMRKKKQIEELQYQVDQLHITNRQLSEKLIQLLEGNQQILQEN 163
                             99**********************************************99999999887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    
MDANESKGNH YLRNQVPPSQ LIPSTKQSRL YSSPQNMQEV EVAENHSLLS LQNPTHNPDS  60
VTFYPTRIFS TSHIHDFSSN ASSLNNDTVF DEAAAAGEQG LTYEKRIKRM ISNRESARRS  120
RMRKKKQIEE LQYQVDQLHI TNRQLSEKLI QLLEGNQQIL QENAQLKERV SSLQVILSDL  180
ISPLQRNAEM PPPTPKST
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60830.13e-34bZIP family protein