PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RcHm_v2.0_Chr3g0480361

Organism

Rosa chinensis

Taxonomic ID

74649

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

bZIP

Protein Properties

Length: 520aa MW: 58349.6 Da PI: 7.0106

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RcHm_v2.0_Chr3g0480361	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	34.8	3.5e-11	227	266	5	44
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNka 44 k rr+++NReAAr+sR+RKka++++Le +L++ ++ RcHm_v2.0_Chr3g0480361 227 KTLRRLAQNREAARKSRLRKKAYVQQLESSRIKLTQLEQE 266 7789************************876666655554 PP

Sequence ? help Back to Top
Protein Sequence Length: 520 aa Download sequence
MGFSRAFEEA EERAGEQPQL ETKLASFMAS SLQGNQLNPQ QQQPQQQDHH HHHHQQQQQQ 60 QQQHHHEIQY GMMQSSSSNI PSGNFMGSSK DSGAYDLGEL DQALFLYLDG QQDHHHHHQA 120 PHHVQDQRHQ TSSGMRPPTL NIFPSEPMHV EPSSTKGVST AGIVSSATSG SKRPSEPSME 180 LANPRKIDAA APSGLPEPAK TIKREGNRKG PTTSSSEQEG PKTPDPKTLR RLAQNREAAR 240 KSRLRKKAYV QQLESSRIKL TQLEQELQRA RTQGMFFGGG LVGAEQGVPV GINNISSDAA 300 VFDMEYARWL EEHHRLMCEL RAAVQEHLPE NELRLFVDNC LAHYDEVMNL KSMVAKTDVF 360 HIVSGMWKTP AERCFMWMGG FRPSEVIKII VTQIEPLTEQ QLMAICSLQQ STSEAEDALT 420 QGLEALNQSL SDTIASDSLS MPPNMANYMG QMALAMNKLS TLEGFVRQAD NLRLQTIHRL 480 QTLLTTRQSA RCLLAIAEYF HRLRALSSLW MGRPRQDHQG

Sequence ? help Back to Top

Protein Sequence Length: 520 aa Download sequence

MGFSRAFEEA EERAGEQPQL ETKLASFMAS SLQGNQLNPQ QQQPQQQDHH HHHHQQQQQQ  60
QQQHHHEIQY GMMQSSSSNI PSGNFMGSSK DSGAYDLGEL DQALFLYLDG QQDHHHHHQA  120
PHHVQDQRHQ TSSGMRPPTL NIFPSEPMHV EPSSTKGVST AGIVSSATSG SKRPSEPSME  180
LANPRKIDAA APSGLPEPAK TIKREGNRKG PTTSSSEQEG PKTPDPKTLR RLAQNREAAR  240
KSRLRKKAYV QQLESSRIKL TQLEQELQRA RTQGMFFGGG LVGAEQGVPV GINNISSDAA  300
VFDMEYARWL EEHHRLMCEL RAAVQEHLPE NELRLFVDNC LAHYDEVMNL KSMVAKTDVF  360
HIVSGMWKTP AERCFMWMGG FRPSEVIKII VTQIEPLTEQ QLMAICSLQQ STSEAEDALT  420
QGLEALNQSL SDTIASDSLS MPPNMANYMG QMALAMNKLS TLEGFVRQAD NLRLQTIHRL  480
QTLLTTRQSA RCLLAIAEYF HRLRALSSLW MGRPRQDHQG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06839.3	0.0	bZIP family protein