PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RcHm_v2.0_Chr4g0407301

Organism

Rosa chinensis

Taxonomic ID

74649

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

bZIP

Protein Properties

Length: 349aa MW: 38065.2 Da PI: 5.6918

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RcHm_v2.0_Chr4g0407301	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	32.1	2.5e-10	224	282	5	63
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 kr++r NR +A rs +RK ++i+eLe+ v++L++ ++L +l l+ l++e+ RcHm_v2.0_Chr4g0407301 224 KRAKRIWANRQSAARSKERKMQYIAELEQNVQTLQTDATSLSAQLTLLQSDTNGLTAEN 282 9*********************************************9999888887776 PP

Sequence ? help Back to Top
Protein Sequence Length: 349 aa Download sequence
MDKDKSPAHG EGLPPPSGRY SSHLPTYNVK TEPSSSPSFP PLASGATVEP GHFGHGMSTE 60 SNHFSHDISR MPDYPPRKLG HRRAHSEIVT LPDDIGFDSD LGVVGVADGP SFSDETEEDL 120 LSMYLDMDKF NSSSAKSAFQ MGEPSASATP AAPATRAVTS STENISMAIH ERPRVRHQHS 180 QSMDGSTTIK TEMLVSSSEE MFAADSRKAM SATKLSELAL IDPKRAKRIW ANRQSAARSK 240 ERKMQYIAEL EQNVQTLQTD ATSLSAQLTL LQSDTNGLTA ENSELKLCLQ TMEQQVHLQD 300 APESSDWPSN AKWWTMMNFA CFGACADAGP SAGHQFYPNN QAMHTFLTA

Sequence ? help Back to Top

Protein Sequence Length: 349 aa Download sequence

MDKDKSPAHG EGLPPPSGRY SSHLPTYNVK TEPSSSPSFP PLASGATVEP GHFGHGMSTE  60
SNHFSHDISR MPDYPPRKLG HRRAHSEIVT LPDDIGFDSD LGVVGVADGP SFSDETEEDL  120
LSMYLDMDKF NSSSAKSAFQ MGEPSASATP AAPATRAVTS STENISMAIH ERPRVRHQHS  180
QSMDGSTTIK TEMLVSSSEE MFAADSRKAM SATKLSELAL IDPKRAKRIW ANRQSAARSK  240
ERKMQYIAEL EQNVQTLQTD ATSLSAQLTL LQSDTNGLTA ENSELKLCLQ TMEQQVHLQD  300
APESSDWPSN AKWWTMMNFA CFGACADAGP SAGHQFYPNN QAMHTFLTA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	237	245	ARSKERKMQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G06070.1	1e-115	bZIP family protein