PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RcHm_v2.0_Chr4g0428031

Organism

Rosa chinensis

Taxonomic ID

74649

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

bZIP

Protein Properties

Length: 182aa MW: 20716.8 Da PI: 10.146

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RcHm_v2.0_Chr4g0428031	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	39.2	1.6e-12	100	159	1	60
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60 +ke +r +r+ +NR++A+ R+RKk ++ Le ++keLe N+ L +++++l +e l+ RcHm_v2.0_Chr4g0428031 100 DKEYRRLKRLLRNRVSAQQARERKKVYVNDLESRAKELEDANSNLEEKISTLINENTMLR 159 58999***********************************************99988666 PP

Sequence ? help Back to Top
Protein Sequence Length: 182 aa Download sequence
MSSSLENQHQ AGSSSSSWKR FNANNSSSSP HSLQDHQSNK KHKLEDSDED MFTVPDVEAI 60 PPDDNPISTS TVTNNNATSK NNPGEIGLSG KRRRGRNPVD KEYRRLKRLL RNRVSAQQAR 120 ERKKVYVNDL ESRAKELEDA NSNLEEKIST LINENTMLRK VLMNTRPKVD ESIEQKQDRS 180 VK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G17609.2	2e-45	bZIP family protein