PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RcHm_v2.0_Chr4g0433931

Organism

Rosa chinensis

Taxonomic ID

74649

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

bZIP

Protein Properties

Length: 699aa MW: 75326.4 Da PI: 6.4655

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RcHm_v2.0_Chr4g0433931	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	43.1	8.9e-14	229	290	2	63
XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 ++ kr r+++NRe+A+ sRqRKk ++eeLe+kv ++ + +L ++++ + e a+lk+++ RcHm_v2.0_Chr4g0433931 229 EDEKRKARLMRNRESAQLSRQRKKHYVEELEDKVRAMHTTIADLNNKISYIMAENATLKQQL 290 6789*******************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 699 aa Download sequence
MEDSVVAEPP TLPPDLTRNA TNSGEDFESL PIPPLDPQFF PSDTGMPSDS FMSDLGFGFG 60 SEDNCDYELT FDDLDNLYLP SEADDFLIPD GFDPTAQPSG DSTLLLDSQS PESGLSKGSS 120 DGVVSGFLNY PSSESGGHDQ EFSENSGGPL SSQGSGIPEA GNSPTHSGNS DRDVSSSNVT 180 TADEKVKIEE EMTRSGLVAK RKKESGGEEG NVESRSSKYR RSESGLNDED EKRKARLMRN 240 RESAQLSRQR KKHYVEELED KVRAMHTTIA DLNNKISYIM AENATLKQQL SCGSGMCPPP 300 QPPPPGMYPM PPMGYPWMPY SPYVVKPQGS QVPLVPIPRL KPQQPAAAPK PKKKSESKTK 360 KVASISFLGL LFFLLLFGGL VPMVNVGFGG SNYVRDRFYD QQRAKVLTVE SHLNGSEGNI 420 PLGISGGKFD VSNKIHERGH KQKEQGLPGV GNASEPLVAS LYVPRNDKLV KIDGNLIIHS 480 VLASEKAKTH KKSREARVEG AKDLVSALAI PEAGVNRGRR APLYRTPAGQ RKALTAGSAD 540 GKLQQWFREG LAGPLLSSGM CTEVFQFDVS AATHSGGIIP ASSVANVSEH GSNSARLNRG 600 GNRRILGGRA IPLAGSNHNV TDEERAIRNN QSSNNFQGSN SSMVVSVLVD PREAGDIDVD 660 GMIKPKSLSR VFVVLLLDSV KYVTYSCVLP RSAPHLVTT

Sequence ? help Back to Top

Protein Sequence Length: 699 aa Download sequence

MEDSVVAEPP TLPPDLTRNA TNSGEDFESL PIPPLDPQFF PSDTGMPSDS FMSDLGFGFG  60
SEDNCDYELT FDDLDNLYLP SEADDFLIPD GFDPTAQPSG DSTLLLDSQS PESGLSKGSS  120
DGVVSGFLNY PSSESGGHDQ EFSENSGGPL SSQGSGIPEA GNSPTHSGNS DRDVSSSNVT  180
TADEKVKIEE EMTRSGLVAK RKKESGGEEG NVESRSSKYR RSESGLNDED EKRKARLMRN  240
RESAQLSRQR KKHYVEELED KVRAMHTTIA DLNNKISYIM AENATLKQQL SCGSGMCPPP  300
QPPPPGMYPM PPMGYPWMPY SPYVVKPQGS QVPLVPIPRL KPQQPAAAPK PKKKSESKTK  360
KVASISFLGL LFFLLLFGGL VPMVNVGFGG SNYVRDRFYD QQRAKVLTVE SHLNGSEGNI  420
PLGISGGKFD VSNKIHERGH KQKEQGLPGV GNASEPLVAS LYVPRNDKLV KIDGNLIIHS  480
VLASEKAKTH KKSREARVEG AKDLVSALAI PEAGVNRGRR APLYRTPAGQ RKALTAGSAD  540
GKLQQWFREG LAGPLLSSGM CTEVFQFDVS AATHSGGIIP ASSVANVSEH GSNSARLNRG  600
GNRRILGGRA IPLAGSNHNV TDEERAIRNN QSSNNFQGSN SSMVVSVLVD PREAGDIDVD  660
GMIKPKSLSR VFVVLLLDSV KYVTYSCVLP RSAPHLVTT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40950.1	1e-144	bZIP family protein