PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RcHm_v2.0_Chr4g0435611

Organism

Rosa chinensis

Taxonomic ID

74649

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

bZIP

Protein Properties

Length: 457aa MW: 50944 Da PI: 6.5941

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RcHm_v2.0_Chr4g0435611	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	31.6	3.7e-10	172	213	4	45
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 k+ rr+++NReAAr+sR+RKka++++Le+ +L++ ++L RcHm_v2.0_Chr4g0435611 172 QKALRRLAQNREAARKSRLRKKAYVQQLENSRLKLSQLEQEL 213 5889*************************9877777766655 PP

Sequence ? help Back to Top
Protein Sequence Length: 457 aa Download sequence
MQSFKPVPTN PELYSHSSFY FRGDDTQTRF ADLGELEHSA TVFPLDDALD LSPSSIFSLK 60 ANNNNFAVVP NTLHYATMNT GPGCLDLGST LSGTGGEQPY MYHHHKGTTS SGNNGHFENW 120 GDSAVAEHSQ QTDTSTDIET EDKNHLRGAQ HGALVVVDSN SIEQANGRTG DQKALRRLAQ 180 NREAARKSRL RKKAYVQQLE NSRLKLSQLE QELQRARQQG MLVGLSGDHG HSTVGSGALT 240 FDFEYARWLD EHQRLIHELR SAMNSHLVDN GLKIHVDSVM THYDEIFRLK SVAAKADVFH 300 MLSGMWKTPA ERCFMWLGGF RSSELLKILG NQLEPLTDQQ LMGICNLQQS SQQTEDALSQ 360 GMEALQQSLV DTLSSTTHGS TVSADVADYM GQMAIAMGKL ATLQDFLIQA DLLRQQTLQQ 420 LHRILTTRQT ARALLVINDY FSRLRALSSL WLARPRD

Sequence ? help Back to Top

Protein Sequence Length: 457 aa Download sequence

MQSFKPVPTN PELYSHSSFY FRGDDTQTRF ADLGELEHSA TVFPLDDALD LSPSSIFSLK  60
ANNNNFAVVP NTLHYATMNT GPGCLDLGST LSGTGGEQPY MYHHHKGTTS SGNNGHFENW  120
GDSAVAEHSQ QTDTSTDIET EDKNHLRGAQ HGALVVVDSN SIEQANGRTG DQKALRRLAQ  180
NREAARKSRL RKKAYVQQLE NSRLKLSQLE QELQRARQQG MLVGLSGDHG HSTVGSGALT  240
FDFEYARWLD EHQRLIHELR SAMNSHLVDN GLKIHVDSVM THYDEIFRLK SVAAKADVFH  300
MLSGMWKTPA ERCFMWLGGF RSSELLKILG NQLEPLTDQQ LMGICNLQQS SQQTEDALSQ  360
GMEALQQSLV DTLSSTTHGS TVSADVADYM GQMAIAMGKL ATLQDFLIQA DLLRQQTLQQ  420
LHRILTTRQT ARALLVINDY FSRLRALSSL WLARPRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68640.1	1e-139	bZIP family protein