PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RcHm_v2.0_Chr4g0436911
Organism
Rosa chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family bZIP
Protein Properties Length: 196aa    MW: 22302.9 Da    PI: 6.2328
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RcHm_v2.0_Chr4g0436911genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_144.72.9e-1496152561
                             CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                  bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61 
                             +++rr+++NRe+ArrsR RK++ ++eL   v  L +eN+ L ++l++ +++ +++  
  RcHm_v2.0_Chr4g0436911  96 RKQRRMISNRESARRSRMRKQKHLDELWSQVLRLRTENHNLMDRLNHVSETHDRVLE 152
                             79*********************************************9998877665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    
MLSGEISGIH YLTTPEIQVP NPANFGNIIM QDNIPSSFHF NGASVFSNLL HTQIPPPGHD  60
QLLATPVQSS SLSNNSSTSD EAEEHVQQLG NIIDQRKQRR MISNRESARR SRMRKQKHLD  120
ELWSQVLRLR TENHNLMDRL NHVSETHDRV LEENAKLKEE ASDLRQMLSE IQISTLRSTE  180
LEVEACSTTL STDLLR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1109116RRSRMRKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G30530.13e-44bZIP family protein