PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RcHm_v2.0_Chr5g0027581
Organism
Rosa chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family G2-like
Protein Properties Length: 91aa    MW: 10612.7 Da    PI: 10.0833
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RcHm_v2.0_Chr5g0027581genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like103.61.2e-321164255
                 G2-like  2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                            pr++Wtp+LH++Fv+av+ LGG+++AtPk+il++m+vkgLt++h+kSHLQ+YR 
  RcHm_v2.0_Chr5g0027581 11 PRIHWTPDLHRCFVHAVDILGGADRATPKKILRIMNVKGLTMNHIKSHLQMYRN 64
                            8****************************************************6 PP
2Myb_DNA-binding51.32.6e-161463348
                            SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
         Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48
                             WT++++  +v+av  lGg    t+k+I r m+ kg+t +++ks++q+y+
  RcHm_v2.0_Chr5g0027581 14 HWTPDLHRCFVHAVDILGGAdraTPKKILRIMNvKGLTMNHIKSHLQMYR 63
                            5*****************99****************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 91 aa     Download sequence    
MVRPYVRSKV PRIHWTPDLH RCFVHAVDIL GGADRATPKK ILRIMNVKGL TMNHIKSHLQ  60
MYRNMKDEEL VQGICINTIC FHTCLTPKFL D
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02060.12e-32G2-like family protein