PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RcHm_v2.0_Chr5g0042601
Organism
Rosa chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WRKY
Protein Properties Length: 126aa    MW: 13962.8 Da    PI: 8.2371
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RcHm_v2.0_Chr5g0042601genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY61.51.6e-19681072059
                             S-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                    WRKY  20 fprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                             +prsYY Ct agCpv+k+ver+++dpk v++tYeg+Hnh+
  RcHm_v2.0_Chr5g0042601  68 TPRSYYECTNAGCPVRKHVERASHDPKSVITTYEGKHNHD 107
                             7**************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 126 aa     Download sequence    
MDVGGIDVTP VVKPIREPQV VVQTLSAVDI LDDGYRWHKY GPSSTSSSPS PAPRISRLRT  60
SLLGFSITPR SYYECTNAGC PVRKHVERAS HDPKSVITTY EGKHNHDVMM SQVQGLVAMT  120
LWDQQP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26640.17e-40WRKY family protein