PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RcHm_v2.0_Chr5g0044361
Organism
Rosa chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family bZIP
Protein Properties Length: 353aa    MW: 38444.6 Da    PI: 4.9149
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RcHm_v2.0_Chr5g0044361genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_144.43.5e-14288337555
                             CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                  bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 
                             +r+rr++kNRe+A rsR+RK+a++ eLe +  +L+ eN +Lk+    l+k+
  RcHm_v2.0_Chr5g0044361 288 RRQRRMIKNRESAARSRARKQAYTVELEAELNQLQDENIKLKQ-CLVLNKK 337
                             69***************************************95.4444444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 353 aa     Download sequence    
MVISDESGGL GCDQNSDGND AKPQPPPSQH ENGESSKQNS IFSLTLDEIQ SKSGKSFGSM  60
NMDEFLANIW SVDENQVCEE QPNQGDHEDP SNDGKDTTSK TGSLSRQGSF SIPTPLCKKT  120
VDEVWSEIDK TQPPPPPNNM NINPGPPQRQ PTIGEITLED FLVKAGIVQE RPQNGMESTT  180
IQPHGGNTNN CNVATSSSTY GDTSFGMGNN LIGSGFFNPQ GFVPNNLSGN GYATAPYPMF  240
GERKMGLGET SCGGTSTAIE KCHSLPESSG TNNKKRIIDG PPEVLVERRQ RRMIKNRESA  300
ARSRARKQAY TVELEAELNQ LQDENIKLKQ CLVLNKKISF LALENTQLVI KVH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G44460.16e-61bZIP family protein