PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RcHm_v2.0_Chr5g0044371
Organism
Rosa chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family bZIP
Protein Properties Length: 344aa    MW: 37606.6 Da    PI: 5.1337
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RcHm_v2.0_Chr5g0044371genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_151.52.2e-16290341556
                             CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                  bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 
                             +r+rr++kNRe+A rsR+RK+a++ eLe +v +Le eN++Lk+++ + kk++
  RcHm_v2.0_Chr5g0044371 290 RRQRRMIKNRESAARSRARKQAYTVELEAEVNQLEDENEKLKQTVVRNKKLS 341
                             79*****************************************999988876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    
MLITMVASDE SGGLGYDHND DSNDAKPQPP PTQHENGESS KQNSILSLTI DEIQSKSGKS  60
FGSMNMDEFL ANIWSADENQ VSSEQPNQGD LDDPANGKDT TSKPASLSRQ GSFSIPTPLC  120
KKTVDEVWSE IDKTRPPPLP NYMSNLDHPQ SQSTIGEITL EDFLVKAGVV QESPSQNRMG  180
SDPIHPQGGD ANNSNMATSS SMYVGTSSEM GNNVIASGHL NPQNAVPNNL PGNRYAIAGY  240
PIFGQNKMIV GNASFCTSNE TEKRHSLPES SGTKNKKRMI DGPLEVAVER RQRRMIKNRE  300
SAARSRARKQ AYTVELEAEV NQLEDENEKL KQTVVRNKKL SSLL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G44460.13e-64bZIP family protein