PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RcHm_v2.0_Chr5g0044421

Organism

Rosa chinensis

Taxonomic ID

74649

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

bZIP

Protein Properties

Length: 546aa MW: 60273.4 Da PI: 6.985

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RcHm_v2.0_Chr5g0044421	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	32.5	1.9e-10	242	283	4	45
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 k rr+++NReAAr+sR+RKka++++Le +L++ ++L RcHm_v2.0_Chr5g0044421 242 AKTLRRLAQNREAARKSRLRKKAYVQQLESSRIKLTQLEQDL 283 6889*************************9777777666665 PP

Sequence ? help Back to Top
Protein Sequence Length: 546 aa Download sequence
MAFISATCPD SSFFLEYKDE NGLLRKSCMA ASHRVVGETG LSDSGPSSSN HHVPYATVLH 60 GINGPSTSFL NQEGSTFDFG ELEEAIARQV RNDEAQAPLF TGRPAATLEM FPSWPMRFHQ 120 TPRVGSSKSA GGESTDSGSQ VNTTALASKG DQTQLEPESP ISKIASSSNN HHHQHQALDQ 180 NHLQFQQQQQ LQQDMAISDT SRATTVAATG TTEASKGQSA PKPNHEKRKG AGSTSENKQL 240 DAKTLRRLAQ NREAARKSRL RKKAYVQQLE SSRIKLTQLE QDLQRARAQG LLMGGCGGGF 300 GNISSAAAIF DMEYARWLED DHRHMSELRT GLQAHLSDND LRVVVDGYIS HYDEIFQLKG 360 VAAKSDVFHL ITGMWASQAE RCFLWMGGFR PSDLIKMLTQ QLDPITEQQV MGICSLQHSS 420 QQAEEALTQG LDQLHQSLID TIAGGPVIDG MQQMAVALGK LTNLEGFVRQ ADNLRHQTLH 480 QLRRILTVRQ AARCFLVIGE YYGRLRALSS LWASRPRESM MSDDNSCQTT TDLQMVQPSQ 540 NHFSSF

Sequence ? help Back to Top

Protein Sequence Length: 546 aa Download sequence

MAFISATCPD SSFFLEYKDE NGLLRKSCMA ASHRVVGETG LSDSGPSSSN HHVPYATVLH  60
GINGPSTSFL NQEGSTFDFG ELEEAIARQV RNDEAQAPLF TGRPAATLEM FPSWPMRFHQ  120
TPRVGSSKSA GGESTDSGSQ VNTTALASKG DQTQLEPESP ISKIASSSNN HHHQHQALDQ  180
NHLQFQQQQQ LQQDMAISDT SRATTVAATG TTEASKGQSA PKPNHEKRKG AGSTSENKQL  240
DAKTLRRLAQ NREAARKSRL RKKAYVQQLE SSRIKLTQLE QDLQRARAQG LLMGGCGGGF  300
GNISSAAAIF DMEYARWLED DHRHMSELRT GLQAHLSDND LRVVVDGYIS HYDEIFQLKG  360
VAAKSDVFHL ITGMWASQAE RCFLWMGGFR PSDLIKMLTQ QLDPITEQQV MGICSLQHSS  420
QQAEEALTQG LDQLHQSLID TIAGGPVIDG MQQMAVALGK LTNLEGFVRQ ADNLRHQTLH  480
QLRRILTVRQ AARCFLVIGE YYGRLRALSS LWASRPRESM MSDDNSCQTT TDLQMVQPSQ  540
NHFSSF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08320.3	0.0	bZIP family protein