PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RcHm_v2.0_Chr6g0251821

Organism

Rosa chinensis

Taxonomic ID

74649

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

bZIP

Protein Properties

Length: 276aa MW: 30146.6 Da PI: 6.3911

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RcHm_v2.0_Chr6g0251821	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	30.2	9.9e-10	96	140	7	51
HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 7 errkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51 +r NReA r++R++Kka+ + Le++v L a N++L k+l+ RcHm_v2.0_Chr6g0251821 96 KKRPLGNREAVRKYREKKKARAASLEDEVTRLRALNQQLMKRLQG 140 467788***********************************9984 PP

Sequence ? help Back to Top
Protein Sequence Length: 276 aa Download sequence
MDDGELEFSN QELDFSIPNM TGELPSSCSM ENIFGDFFKD TDTACTHNHI CNPPSGPDSS 60 HRHTCIHVHT KILSSGQSED KAGTDDTAES GEKNSKKRPL GNREAVRKYR EKKKARAASL 120 EDEVTRLRAL NQQLMKRLQG QTALEAEIAR LKCLLVDIRG RIEGEIGSFP YQKPVNPGLQ 180 SHNMTGTYVM NPCNMQCNDQ LYCLQRGDDG KRGDGTGMNG QGFSGCEFEN LQCFTNQDGG 240 SMGLSGCDLG NVMLESNVNL SGTKKRKGGA RAAAAN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35040.1	1e-84	bZIP family protein