PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RcHm_v2.0_Chr6g0257641

Organism

Rosa chinensis

Taxonomic ID

74649

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

bZIP

Protein Properties

Length: 432aa MW: 46913.5 Da PI: 10.131

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RcHm_v2.0_Chr6g0257641	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	44.3	3.8e-14	354	401	5	52
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleel 52 +r+rr++kNRe+A rsR+RK+a++ eLe +v++L++ N++L+ + e+ RcHm_v2.0_Chr6g0257641 354 RRQRRMIKNRESAARSRARKQAYTLELEAEVAKLKEMNEELQRKQAEI 401 79************************************9887665444 PP

Sequence ? help Back to Top
Protein Sequence Length: 432 aa Download sequence
MGSNINFKNY GDVQNGDVNG GRLAGNFSLA RQSSVYSLTF DEFQNTMGGL GKDFGSMNMD 60 ELLKNIWSAE ETQGMVTSTC GAAEGNAPGG NLQRQGSLTL PRTLSQKTVD DVWKELIRDS 120 GDAKYGNVGG GQNLPQEQRQ QTLGEMTLEE FLARAGVVRE DAQEMARPGN GGFFAELFRQ 180 SNNTGLAPGF QQASRNNGLL SSRVESNNNS VPNQSPNLAL NVGGLRTSQQ QTHQLPQQQQ 240 PIFPKPATLS FSPSMHLVSN AQLTSPRSRG PVSVVVEPSR NTAFSQGGGF PSAGIGMGGL 300 GAGGVTVASK SPINQMSPDV IAKSSADTSS LSPVPYLFTR GRKANGALEK VVERRQRRMI 360 KNRESAARSR ARKQAYTLEL EAEVAKLKEM NEELQRKQAE IVEMQKDEIL ETMQRKWGGK 420 RQCLRRTLTG PW

Sequence ? help Back to Top

Protein Sequence Length: 432 aa Download sequence

MGSNINFKNY GDVQNGDVNG GRLAGNFSLA RQSSVYSLTF DEFQNTMGGL GKDFGSMNMD  60
ELLKNIWSAE ETQGMVTSTC GAAEGNAPGG NLQRQGSLTL PRTLSQKTVD DVWKELIRDS  120
GDAKYGNVGG GQNLPQEQRQ QTLGEMTLEE FLARAGVVRE DAQEMARPGN GGFFAELFRQ  180
SNNTGLAPGF QQASRNNGLL SSRVESNNNS VPNQSPNLAL NVGGLRTSQQ QTHQLPQQQQ  240
PIFPKPATLS FSPSMHLVSN AQLTSPRSRG PVSVVVEPSR NTAFSQGGGF PSAGIGMGGL  300
GAGGVTVASK SPINQMSPDV IAKSSADTSS LSPVPYLFTR GRKANGALEK VVERRQRRMI  360
KNRESAARSR ARKQAYTLEL EAEVAKLKEM NEELQRKQAE IVEMQKDEIL ETMQRKWGGK  420
RQCLRRTLTG PW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G45249.1	7e-88	bZIP family protein